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Species belonging to selected taxon:
Drosophila pseudoobscura
ABOUT THIS RECORD
ID:
MNEST036942
species:
Drosophila pseudoobscura
miRNA family:
mir-219
source:
miRBase, original name:
dps-mir-219
(
MI0001328
)
Taxonomy by NCBI:
Drosophila pseudoobscura
pseudoobscura subgroup
obscura group
Sophophora
Drosophila
Drosophiliti
Drosophilina
Drosophilini
Drosophilinae
Drosophilidae
Ephydroidea
Acalyptratae
Schizophora
Cyclorrhapha
Eremoneura
Muscomorpha
Brachycera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGATTGTCCAAACGCAATTCTTG
miRNA*
AGGGTTGTGACTGGACATCGCG
mismatches:
2
bulges:
1
View larger
pre-miRNA
TAATTCGATTTTTAGCTA
TGATTGTCCAAACGCAATTCTTG
TTGATATCCAATACTCA
AGGGTTGTGACTGGACATCGCG
GCTCGAAATAAGAATACAAC
dot-bracket secondary structure
..((((.(((((.(((..
((((.(((((..(((((((((((
...((.....))...))
)))))))))..)))))))))..
))).)))))..)))).....
SIMILARITIES
miRBase
dpe-mir-219
:
3e-50
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-219: 7e-24
Identical with:
dpe-mir-219
from miRBase (
MNEST036864
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record